2WU9 image
Entry Detail
PDB ID:
2WU9
Keywords:
Title:
Crystal structure of peroxisomal KAT2 from Arabidopsis thaliana
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-10-01
Release Date:
2010-05-12
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:3-KETOACYL-COA THIOLASE 2, PEROXISOMAL
Chain IDs:A, B
Chain Length:442
Number of Molecules:2
Biological Source:ARABIDOPSIS THALIANA
Ligand Molecules
Primary Citation
Peroxisomal Plant 3-Ketoacyl-Coa Thiolases Structure and Activity are Regulated by a Sensitive Redox Switch
J.Biol.Chem. 285 24078 ? (2010)
PMID: 20463027 DOI: 10.1074/JBC.M110.106013

Abstact

The breakdown of fatty acids, performed by the beta-oxidation cycle, is crucial for plant germination and sustainability. beta-Oxidation involves four enzymatic reactions. The final step, in which a two-carbon unit is cleaved from the fatty acid, is performed by a 3-ketoacyl-CoA thiolase (KAT). The shortened fatty acid may then pass through the cycle again (until reaching acetoacetyl-CoA) or be directed to a different cellular function. Crystal structures of KAT from Arabidopsis thaliana and Helianthus annuus have been solved to 1.5 and 1.8 A resolution, respectively. Their dimeric structures are very similar and exhibit a typical thiolase-like fold; dimer formation and active site conformation appear in an open, active, reduced state. Using an interdisciplinary approach, we confirmed the potential of plant KATs to be regulated by the redox environment in the peroxisome within a physiological range. In addition, co-immunoprecipitation studies suggest an interaction between KAT and the multifunctional protein that is responsible for the preceding two steps in beta-oxidation, which would allow a route for substrate channeling. We suggest a model for this complex based on the bacterial system.

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