2WSF image
Entry Detail
PDB ID:
2WSF
Keywords:
Title:
Improved Model of Plant Photosystem I
Biological Source:
PDB Version:
Deposition Date:
2009-09-05
Release Date:
2009-11-17
Method Details:
Experimental Method:
Resolution:
3.48 Å
R-Value Free:
0.42
R-Value Work:
0.39
R-Value Observed:
0.39
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:AT3G54890
Chain IDs:A (auth: 1)
Chain Length:241
Number of Molecules:1
Biological Source:ARABIDOPSIS THALIANA
Polymer Type:polypeptide(L)
Description:TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I
Chain IDs:B (auth: 2)
Chain Length:269
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:LHCA3
Chain IDs:C (auth: 3)
Chain Length:276
Number of Molecules:1
Biological Source:GLYCINE MAX
Polymer Type:polypeptide(L)
Description:CHLOROPHYLL A-B BINDING PROTEIN P4, CHLOROPLASTIC
Chain IDs:D (auth: 4)
Chain Length:251
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1
Chain IDs:E (auth: A)
Chain Length:758
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2
Chain IDs:F (auth: B)
Chain Length:734
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I IRON-SULFUR CENTER
Chain IDs:G (auth: C)
Chain Length:81
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC
Chain IDs:H (auth: D)
Chain Length:212
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC
Chain IDs:I (auth: E)
Chain Length:143
Number of Molecules:1
Biological Source:ARABIDOPSIS THALIANA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC
Chain IDs:J (auth: F)
Chain Length:231
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC
Chain IDs:K (auth: G)
Chain Length:167
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLASTIC
Chain IDs:L (auth: H)
Chain Length:144
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII
Chain IDs:M (auth: I)
Chain Length:40
Number of Molecules:1
Biological Source:PISUM SATIVUM
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT IX
Chain IDs:N (auth: J)
Chain Length:44
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC
Chain IDs:O (auth: K)
Chain Length:131
Number of Molecules:1
Biological Source:HORDEUM VULGARE
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC
Chain IDs:P (auth: L)
Chain Length:216
Number of Molecules:1
Biological Source:SPINACIA OLERACEA
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I-N SUBUNIT
Chain IDs:Q (auth: N)
Chain Length:170
Number of Molecules:1
Biological Source:PHASEOLUS VULGARIS
Polymer Type:polypeptide(L)
Description:PHOTOSYSTEM I-N SUBUNIT
Chain IDs:R
Chain Length:53
Number of Molecules:1
Biological Source:PISUM SATIVUM
Peptide-like Molecules
PRD_900003
Primary Citation
Structure determination and improved model of plant photosystem I.
J. Biol. Chem. 285 3478 3486 (2010)
PMID: 19923216 DOI: 10.1074/jbc.M109.072645

Abstact

Photosystem I functions as a sunlight energy converter, catalyzing one of the initial steps in driving oxygenic photosynthesis in cyanobacteria, algae, and higher plants. Functionally, Photosystem I captures sunlight and transfers the excitation energy through an intricate and precisely organized antenna system, consisting of a pigment network, to the center of the molecule, where it is used in the transmembrane electron transfer reaction. Our current understanding of the sophisticated mechanisms underlying these processes has profited greatly from elucidation of the crystal structures of the Photosystem I complex. In this report, we describe the developments that ultimately led to enhanced structural information of plant Photosystem I. In addition, we report an improved crystallographic model at 3.3-A resolution, which allows analysis of the structure in more detail. An improved electron density map yielded identification and tracing of subunit PsaK. The location of an additional ten beta-carotenes as well as five chlorophylls and several loop regions, which were previously uninterpretable, are now modeled. This represents the most complete plant Photosystem I structure obtained thus far, revealing the locations of and interactions among 17 protein subunits and 193 non-covalently bound photochemical cofactors. Using the new crystal structure, we examine the network of contacts among the protein subunits from the structural perspective, which provide the basis for elucidating the functional organization of the complex.

Legend

Protein

Chemical

Disease

Primary Citation of related structures