2WS9 image
Deposition Date 2009-09-04
Release Date 2010-08-25
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2WS9
Keywords:
Title:
Equine Rhinitis A Virus at Low pH
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:P1
Chain IDs:A (auth: 1)
Chain Length:246
Number of Molecules:1
Biological Source:EQUINE RHINITIS A VIRUS
Polymer Type:polypeptide(L)
Molecule:P1
Chain IDs:B (auth: 2)
Chain Length:230
Number of Molecules:1
Biological Source:EQUINE RHINITIS A VIRUS
Polymer Type:polypeptide(L)
Molecule:P1
Chain IDs:C (auth: 3)
Chain Length:226
Number of Molecules:1
Biological Source:EQUINE RHINITIS A VIRUS
Polymer Type:polypeptide(L)
Molecule:P1
Chain IDs:D (auth: 4)
Chain Length:80
Number of Molecules:1
Biological Source:EQUINE RHINITIS A VIRUS
Ligand Molecules
Primary Citation
Equine Rhinitis a Virus and its Low Ph Empty Particle: Clues Towards an Aphthovirus Entry Mechanism?
Plos Pathog. 5 620 ? (2009)
PMID: 19816570 DOI: 10.1371/JOURNAL.PPAT.1000620

Abstact

Equine rhinitis A virus (ERAV) is closely related to foot-and-mouth disease virus (FMDV), belonging to the genus Aphthovirus of the Picornaviridae. How picornaviruses introduce their RNA genome into the cytoplasm of the host cell to initiate replication is unclear since they have no lipid envelope to facilitate fusion with cellular membranes. It has been thought that the dissociation of the FMDV particle into pentameric subunits at acidic pH is the mechanism for genome release during cell entry, but this raises the problem of how transfer across the endosome membrane of the genome might be facilitated. In contrast, most other picornaviruses form 'altered' particle intermediates (not reported for aphthoviruses) thought to induce membrane pores through which the genome can be transferred. Here we show that ERAV, like FMDV, dissociates into pentamers at mildly acidic pH but demonstrate that dissociation is preceded by the transient formation of empty 80S particles which have released their genome and may represent novel biologically relevant intermediates in the aphthovirus cell entry process. The crystal structures of the native ERAV virus and a low pH form have been determined via highly efficient crystallization and data collection strategies, required due to low virus yields. ERAV is closely similar to FMDV for VP2, VP3 and part of VP4 but VP1 diverges, to give a particle with a pitted surface, as seen in cardioviruses. The low pH particle has internal structure consistent with it representing a pre-dissociation cell entry intermediate. These results suggest a unified mechanism of picornavirus cell entry.

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Primary Citation of related structures