2WQL image
Deposition Date 2009-08-24
Release Date 2009-09-01
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2WQL
Keywords:
Title:
CRYSTAL STRUCTURE OF THE MAJOR CARROT ALLERGEN DAU C 1
Biological Source:
Source Organism:
DAUCUS CAROTA (Taxon ID: 4039)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.23
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MAJOR ALLERGEN DAU C 1
Mutagens:YES
Chain IDs:A, B, C, D
Chain Length:154
Number of Molecules:4
Biological Source:DAUCUS CAROTA
Primary Citation
Structure of the Major Carrot Allergen Dau C 1.
Acta Crystallogr.,Sect.D 65 1206 ? (2009)
PMID: 19923716 DOI: 10.1107/S0907444909034854

Abstact

Dau c 1 is a major allergen of carrot (Daucus carota) which displays IgE cross-reactivity with the homologous major birch-pollen allergen Bet v 1. The crystal structure of Dau c 1 has been determined to a resolution of 2.7 A, revealing tight dimers. The structure of Dau c 1 is similar to those of the major allergens from celery, Api g 1, and birch pollen, Bet v 1. Electron density has been observed in the hydrophobic cavity of each monomer and has been modelled with polyethylene glycol oligomers of varying length. Comparison of the surface topology and physicochemical properties of Dau c 1 and Bet v 1 revealed that they may have some, but not all, epitopes in common. This is in agreement with the observation that the majority of carrot-allergic patients have Bet v 1 cross-reactive IgE antibodies, whereas others have Dau c 1-specific IgE antibodies which do not recognize Bet v 1.

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Primary Citation of related structures