2WJ8 image
Deposition Date 2009-05-25
Release Date 2009-12-08
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2WJ8
Title:
Respiratory Syncitial Virus RiboNucleoProtein
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.29 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NUCLEOPROTEIN
Gene (Uniprot):N
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
Chain Length:391
Number of Molecules:20
Biological Source:HUMAN RESPIRATORY SYNCYTIAL VIRUS A STRAIN LONG
Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(*CP*CP*CP*CP*CP*C)-3')
Chain IDs:U (auth: a), V (auth: b), W (auth: c), X (auth: d), Y (auth: e), Z (auth: f), AA (auth: g), BA (auth: h), CA (auth: i), DA (auth: j), EA (auth: k), FA (auth: l), GA (auth: m), HA (auth: n), IA (auth: o), JA (auth: p), KA (auth: q), LA (auth: r), MA (auth: s), NA (auth: t)
Chain Length:391
Number of Molecules:20
Biological Source:ESCHERICHIA COLI
Ligand Molecules
Primary Citation
Crystal Structure of a Nucleocapsid-Like Nucleoprotein-RNA Complex of Respiratory Syncytial Virus
Science 326 1279 ? (2009)
PMID: 19965480 DOI: 10.1126/SCIENCE.1177634

Abstact

The respiratory syncytial virus (RSV) is an important human pathogen, yet neither a vaccine nor effective therapies are available to treat infection. To help elucidate the replication mechanism of this RNA virus, we determined the three-dimensional (3D) crystal structure at 3.3 A resolution of a decameric, annular ribonucleoprotein complex of the RSV nucleoprotein (N) bound to RNA. This complex mimics one turn of the viral helical nucleocapsid complex, which serves as template for viral RNA synthesis. The RNA wraps around the protein ring, with seven nucleotides contacting each N subunit, alternating rows of four and three stacked bases that are exposed and buried within a protein groove, respectively. Combined with electron microscopy data, this structure provides a detailed model for the RSV nucleocapsid, in which the bases are accessible for readout by the viral polymerase. Furthermore, the nucleoprotein structure highlights possible key sites for drug targeting.

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Protein

Chemical

Disease

Primary Citation of related structures
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