2WD5 image
Deposition Date 2009-03-20
Release Date 2010-08-11
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2WD5
Keywords:
Title:
SMC hinge heterodimer (Mouse)
Biological Source:
Source Organism:
MUS MUSCULUS (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.30
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1A
Gene (Uniprot):Smc1a
Chain IDs:A
Chain Length:233
Number of Molecules:1
Biological Source:MUS MUSCULUS
Polymer Type:polypeptide(L)
Molecule:STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Gene (Uniprot):Smc3
Chain IDs:B
Chain Length:213
Number of Molecules:1
Biological Source:MUS MUSCULUS
Primary Citation
A Positively Charged Channel within the Smc1/Smc3 Hinge Required for Sister Chromatid Cohesion.
Embo J. 30 364 ? (2011)
PMID: 21139566 DOI: 10.1038/EMBOJ.2010.315

Abstact

Cohesin's structural maintenance of chromosome 1 (Smc1) and Smc3 are rod-shaped proteins with 50-nm long intra-molecular coiled-coil arms with a heterodimerization domain at one end and an ABC-like nucleotide-binding domain (NBD) at the other. Heterodimerization creates V-shaped molecules with a hinge at their centre. Inter-connection of NBDs by Scc1 creates a tripartite ring within which, it is proposed, sister DNAs are entrapped. To investigate whether cohesin's hinge functions as a possible DNA entry gate, we solved the crystal structure of the hinge from Mus musculus, which like its bacterial counterpart is characterized by a pseudo symmetric heterodimeric torus containing a small channel that is positively charged. Mutations in yeast Smc1 and Smc3 that together neutralize the channel's charge have little effect on dimerization or association with chromosomes, but are nevertheless lethal. Our finding that neutralization reduces acetylation of Smc3, which normally occurs during replication and is essential for cohesion, suggests that the positively charged channel is involved in a major conformational change during S phase.

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Primary Citation of related structures