2WCN image
Deposition Date 2009-03-12
Release Date 2009-11-24
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2WCN
Keywords:
Title:
Solution structure of an LNA-modified quadruplex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
20
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*DGP*LCG*DGP*LCG*DTP*DTP*DTP *DTP*DGP*LCG*DGP*LCG)-3')
Chain IDs:A, B
Chain Length:12
Number of Molecules:2
Biological Source:OXYTRICHA NOVA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
LCG A DG ?
Ligand Molecules
Primary Citation
Solution Structure of a Locked Nucleic Acid Modified Quadruplex: Introducing the V4 Folding Topology.
Angew.Chem.Int.Ed.Engl. 48 3099 ? (2009)
PMID: 19308940 DOI: 10.1002/ANIE.200806244

Abstact

Sharp curves: The structure of a locked nucleic acid modified telomeric sequence from Oxytricha nova displays a remarkable folding topology, distinct from the native O. nova quadruplex. Each guanine stretch folds back in a V-shaped turn that puts the first and fourth guanines in the same tetrad, looping over a tetrad with a sharp turn in the DNA backbone, showing how subtle interplay between sequence and conformation defines the folding topology.

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Primary Citation of related structures