2W9D image
Deposition Date 2009-01-23
Release Date 2009-02-03
Last Version Date 2024-10-16
Entry Detail
PDB ID:
2W9D
Keywords:
Title:
Structure of Fab fragment of the ICSM 18 - anti-Prp therapeutic antibody at 1.57 A resolution.
Biological Source:
Source Organism:
MUS MUSCULUS (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
1.57 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ICSM 18-ANTI-PRP THERAPEUTIC FAB HEAVY CHAIN
Chain IDs:A (auth: H)
Chain Length:215
Number of Molecules:1
Biological Source:MUS MUSCULUS
Polymer Type:polypeptide(L)
Molecule:ICSM 18-ANTI-PRP THERAPEUTIC FAB LIGHT CHAIN
Chain IDs:B (auth: L)
Chain Length:212
Number of Molecules:1
Biological Source:MUS MUSCULUS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PCA B GLU PYROGLUTAMIC ACID
Ligand Molecules
Primary Citation
Crystal Structure of Human Prion Protein Bound to a Therapeutic Antibody.
Proc.Natl.Acad.Sci.USA 106 2554 ? (2009)
PMID: 19204296 DOI: 10.1073/PNAS.0809170106

Abstact

Prion infection is characterized by the conversion of host cellular prion protein (PrP(C)) into disease-related conformers (PrP(Sc)) and can be arrested in vivo by passive immunization with anti-PrP monoclonal antibodies. Here, we show that the ability of an antibody to cure prion-infected cells correlates with its binding affinity for PrP(C) rather than PrP(Sc). We have visualized this interaction at the molecular level by determining the crystal structure of human PrP bound to the Fab fragment of monoclonal antibody ICSM 18, which has the highest affinity for PrP(C) and the highest therapeutic potency in vitro and in vivo. In this crystal structure, human PrP is observed in its native PrP(C) conformation. Interactions between neighboring PrP molecules in the crystal structure are mediated by close homotypic contacts between residues at position 129 that lead to the formation of a 4-strand intermolecular beta-sheet. The importance of this residue in mediating protein-protein contact could explain the genetic susceptibility and prion strain selection determined by polymorphic residue 129 in human prion disease, one of the strongest common susceptibility polymorphisms known in any human disease.

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Primary Citation of related structures