2W4X image
Entry Detail
PDB ID:
2W4X
Keywords:
Title:
BtGH84 in complex with STZ
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-12-02
Release Date:
2009-02-24
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:O-GLCNACASE BT_4395
Chain IDs:A
Chain Length:716
Number of Molecules:1
Biological Source:BACTEROIDES THETAIOTAOMICRON
Primary Citation
Structural Insight Into the Mechanism of Streptozotocin Inhibition of O-Glcnacase.
Carbohydr.Res. 344 627 ? (2009)
PMID: 19217614 DOI: 10.1016/J.CARRES.2008.12.007

Abstact

Despite decades of its use in diabetes research, the mechanism of cytotoxicity of streptozotocin (STZ) toward pancreatic beta-islet cells has remained a topic of discussion. Although STZ toxicity is likely a function of its capacity to promote DNA alkylation, it has been proposed that STZ induces pancreatic beta-cell death through O-GlcNAcase inhibition. In this report, we explore the binding mode of STZ to a close homolog of human O-GlcNAcase, BtGH84 from Bacteroides thetaiotaomicron. Our results show that STZ binds in the enzyme active site in its intact form, without the formation of a covalent adduct, consistent with solution studies on BtGH84 and human O-GlcNAcase, as well as with structural work on a homolog from Clostridium perfringens. The active site of the BtGH84 is considerably deformed upon STZ binding and as a result the catalytic machinery is expelled from the binding cavity.

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