2W0Q image
Deposition Date 2008-08-20
Release Date 2008-12-16
Last Version Date 2025-04-09
Entry Detail
PDB ID:
2W0Q
Keywords:
Title:
E. coli copper amine oxidase in complex with Xenon
Biological Source:
Source Organism:
ESCHERICHIA COLI (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.48 Å
R-Value Free:
0.21
R-Value Work:
0.15
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:COPPER AMINE OXIDASE
Gene (Uniprot):tynA
Chain IDs:A, B
Chain Length:727
Number of Molecules:2
Biological Source:ESCHERICHIA COLI
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TPQ A TYR ?
Primary Citation
Structure of a Xenon Derivative of Escherichia Coli Copper Amine Oxidase: Confirmation of the Proposed Oxygen-Entry Pathway.
Acta Crystallogr.,Sect.F 64 1105 ? (2008)
PMID: 19052360 DOI: 10.1107/S1744309108036373

Abstact

The mechanism of molecular oxygen entry into the buried active site of the copper amine oxidase family has been investigated in several family members using biochemical, structural and in silico methods. These studies have revealed a structurally conserved beta-sandwich which acts as a hydrophobic reservoir from which molecular oxygen can take several species-specific preferred pathways to the active site. Escherichia coli copper amine oxidase (ECAO) possesses an extra N-terminal domain that lies close to one entrance to the beta-sandwich. In order to investigate whether the presence of this domain alters molecular oxygen entry in this enzyme, xenon was used as a molecular oxygen binding-site probe. The resulting 2.5 A resolution X-ray crystal structure reveals xenon bound in similar positions to those observed in xenon-derivative crystal structures of other family members, suggesting that the N-terminal domain does not affect oxygen entry and that the E. coli enzyme takes up oxygen in a similar manner to the rest of the copper amine oxidase family.

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Primary Citation of related structures
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