2W0O image
Deposition Date 2008-08-20
Release Date 2008-08-26
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2W0O
Keywords:
Title:
Horse spleen apoferritin
Biological Source:
Source Organism:
EQUUS CABALLUS (Taxon ID: 9796)
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
F 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FERRITIN LIGHT CHAIN
Gene (Uniprot):FTL
Chain IDs:A
Chain Length:174
Number of Molecules:1
Biological Source:EQUUS CABALLUS
Primary Citation
Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem. 112 77 ? (2012)
PMID: 22561545 DOI: 10.1016/J.JINORGBIO.2012.02.031

Abstact

There are extensive structural similarities between eukaryotic and prokaryotic ferritins. However, there is one essential difference between these two types of ferritins: bacterioferritins contain haem whereas eukaryotic ferritins are considered to be non-haem proteins. In vitro experiments had shown that horse spleen apoferritin or recombinant horse L chain apoferritins, when co-crystallised with haemin, undergoes demetallation of the porphyrin. In the present study a cofactor has been isolated directly from horse spleen apoferritin and from crystals of the mutant horse L chain apoferritin (E53Q, E56Q, E57Q, E60Q and R59M) which had been co-crystallised with haemin. In both cases the HPLC/ESI-MS results confirm that the cofactor is a N-ethylprotoporphyrin IX. Crystal structures of wild type L chain horse apoferritin and its three mutants co-crystallised with haemin have been determined to high resolution and in all cases a metal-free molecule derived from haemin was found in the hydrophobic pocket, close to the two-fold axis. The X-ray structure of the E53Q, E56Q, E57Q, E60Q+R59M recombinant horse L-chain apoferritin has been obtained at a higher resolution (1.16Å) than previously reported for any mammalian apoferritins. Similar evidence for a metal-free molecule derived from haemin was found in the electron density map of horse spleen apoferritin (at a resolution of 1.5Å). The out-of-plane distortion of the observed porphyrin is clearly compatible with an N-alkyl porphyrin. We conclude that L-chain ferritins are capable of binding and demetallating haemin, generating in the process N-ethylprotoporphyrin IX both in vivo and in vitro.

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