ISDA

Entry Detail

PDB ID:

2VWM

Keywords:

BLOOD CLOTTING

Title:

Aminopyrrolidine Factor Xa inhibitor

Biological Source:

Source Organism:

HOMO SAPIENS

Host Organism:

ESCHERICHIA COLI

PDB Version:

Deposition Date:

2008-06-26

Release Date:

2009-07-07

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.96 Å

R-Value Free:

0.27

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:ACTIVATED FACTOR XA HEAVY CHAIN
Mutations:YES
Chain IDs:A, B
Chain Length:241
Number of Molecules:2
Biological Source:HOMO SAPIENS

UniProt ID:P00742 Pfam ID:PF00089, PF14670 EC:3.4.21.6

Protein Blast

Polymer Type:polypeptide(L)
Description:FACTOR X LIGHT CHAIN
Chain IDs:C (auth: K), D (auth: L)
Chain Length:55
Number of Molecules:2
Biological Source:HOMO SAPIENS

UniProt ID:P00742 Pfam ID:PF00089, PF14670 EC:3.4.21.6

Ligand Molecules

LZI

Primary Citation

Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.

Zbinden, K.G, Anselm, L, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Thomi, S, Unger, R, Haap, W.Show

Eur.J.Med.Chem. 44 2787 ? (2009)

PMID: 19200624 DOI: 10.1016/J.EJMECH.2008.12.025

Abstact

Starting from a hit identified by focused screening, 3-aminopyrrolidine factor Xa inhibitors were designed. The binding mode as determined by X-ray structural analysis as well as the pharmacokinetic behaviour of selected compounds is discussed.

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Protein

Chemical

Disease

Primary Citation of related structures