2VVE image
Entry Detail
PDB ID:
2VVE
Keywords:
Title:
Crystal structure of the stem and receptor binding domain of the spike protein P1 from bacteriophage PM2
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-06-06
Release Date:
2008-09-16
Method Details:
Experimental Method:
Resolution:
1.77 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:SPIKE PROTEIN P1
Chain IDs:A, B
Chain Length:254
Number of Molecules:2
Biological Source:PSEUDOALTEROMONAS PHAGE PM2
Primary Citation
Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell 31 749 ? (2008)
PMID: 18775333 DOI: 10.1016/J.MOLCEL.2008.06.026

Abstact

Recent, primarily structural observations indicate that related viruses, harboring no sequence similarity, infect hosts of different domains of life. One such clade of viruses, defined by common capsid architecture and coat protein fold, is the so-called PRD1-adenovirus lineage. Here we report the structure of the marine lipid-containing bacteriophage PM2 determined by crystallographic analyses of the entire approximately 45 MDa virion and of the outer coat proteins P1 and P2, revealing PM2 to be a primeval member of the PRD1-adenovirus lineage with an icosahedral shell and canonical double beta barrel major coat protein. The view of the lipid bilayer, richly decorated with membrane proteins, constitutes a rare visualization of an in vivo membrane. The viral membrane proteins P3 and P6 are organized into a lattice, suggesting a possible assembly pathway to produce the mature virus.

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