2VRS image
Deposition Date 2008-04-14
Release Date 2009-01-13
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2VRS
Keywords:
Title:
Structure of avian reovirus sigmaC117-326, C2 crystal form
Biological Source:
Source Organism:
AVIAN REOVIRUS (Taxon ID: 38170)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SIGMA-C CAPSID PROTEIN
Gene (Uniprot):ORF3
Chain IDs:A, B, C
Chain Length:211
Number of Molecules:3
Biological Source:AVIAN REOVIRUS
Primary Citation

Abstact

Avian reovirus fibre, a homo-trimer of the sigmaC protein, is a minor component of the avian reovirus outer capsid. It is anchored via a short N-terminal sequence to the inner capsid lambdaC pentamer, and its protruding globular C-terminal domain is responsible for primary host cell attachment. We have previously solved the structure of a receptor-binding fragment in which residues 160-191 form a triple beta-spiral and 196-326 a beta-barrel head domain. Here we have expressed, purified and crystallized a major sigmaC fragment comprising residues 117-326. Its structure, which was solved by molecular replacement using the previously determined receptor-binding domain structure and refined to 1.75 A (0.175 nm) resolution, reveals an alpha-helical triple coiled-coil connected to the previously solved structure by a zinc-ion-containing linker. The coiled-coil domain contains two chloride ion binding sites, as well as specific trimerization and registration sequences. The linker may act as a functionally important hinge.

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Primary Citation of related structures
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