2VQ0 image
Deposition Date 2008-03-10
Release Date 2008-05-13
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2VQ0
Keywords:
Title:
Capsid structure of Sesbania mosaic virus coat protein deletion mutant rCP(delta 48 to 59)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
R-Value Free:
0.25
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
R 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:COAT PROTEIN
Chain IDs:A, B, C
Chain Length:256
Number of Molecules:3
Biological Source:SESBANIA MOSAIC VIRUS
Ligand Molecules
Primary Citation
Structure of Recombinant Capsids Formed by the Beta-Annulus Deletion Mutant-Rcp (Delta 48-59) of Sesbania Mosaic Virus
Virology 375 190 ? (2008)
PMID: 18295296 DOI: 10.1016/J.VIROL.2008.01.023

Abstact

A unique feature of several T=3 icosahedral viruses is the presence of a structure called the beta-annulus formed by extensive hydrogen bonding between protein subunits related by icosahedral three-fold axis of symmetry. This unique structure has been suggested as a molecular switch that determines the T=3 capsid assembly. In order to examine the importance of the beta-annulus, a deletion mutant of Sesbania mosaic virus coat protein in which residues 48-59 involved in the formation of the beta-annulus were deleted retaining the rest of the residues in the amino terminal segment (rCP (Delta48-59)) was constructed. When expressed in Escherichia coli, the mutant protein assembled into virus like particles of sizes close to that of the wild type virus particles. The purified capsids were crystallized and their three dimensional structure was determined at 3.6 A resolution by X-ray crystallography. The mutant capsid structure closely resembled that of the native virus particles. However, surprisingly, the structure revealed that the assembly of the particles has proceeded without the formation of the beta-annulus. Therefore, the beta-annulus is not essential for T=3 capsid assembly as speculated earlier and may be formed as a consequence of the particle assembly. This is the first structural demonstration that the virus particle morphology with and without the beta-annulus could be closely similar.

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Primary Citation of related structures