2VPW image
Deposition Date 2008-03-09
Release Date 2008-06-10
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2VPW
Keywords:
Title:
Polysulfide reductase with bound menaquinone
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.27
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:THIOSULFATE REDUCTASE
Gene (Uniprot):TT_C0155
Chain IDs:A, D (auth: E)
Chain Length:765
Number of Molecules:2
Biological Source:THERMUS THERMOPHILUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NRFC PROTEIN
Gene (Uniprot):nrfC
Chain IDs:B, E (auth: F)
Chain Length:195
Number of Molecules:2
Biological Source:THERMUS THERMOPHILUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HYPOTHETICAL MEMBRANE SPANNING PROTEIN
Gene (Uniprot):TT_C0153
Chain IDs:C, F (auth: G)
Chain Length:253
Number of Molecules:2
Biological Source:THERMUS THERMOPHILUS
Primary Citation
Molecular Mechanism of Energy Conservation in Polysulfide Respiration.
Nat.Struct.Mol.Biol. 15 730 ? (2008)
PMID: 18536726 DOI: 10.1038/NSMB.1434

Abstact

Bacterial polysulfide reductase (PsrABC) is an integral membrane protein complex responsible for quinone-coupled reduction of polysulfide, a process important in extreme environments such as deep-sea vents and hot springs. We determined the structure of polysulfide reductase from Thermus thermophilus at 2.4-A resolution, revealing how the PsrA subunit recognizes and reduces its unique polyanionic substrate. The integral membrane subunit PsrC was characterized using the natural substrate menaquinone-7 and inhibitors, providing a comprehensive representation of a quinone binding site and revealing the presence of a water-filled cavity connecting the quinone binding site on the periplasmic side to the cytoplasm. These results suggest that polysulfide reductase could be a key energy-conserving enzyme of the T. thermophilus respiratory chain, using polysulfide as the terminal electron acceptor and pumping protons across the membrane via a previously unknown mechanism.

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