2VM8 image
Deposition Date 2008-01-24
Release Date 2008-08-26
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2VM8
Title:
Human CRMP-2 crystallised in the presence of Mg
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.32
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DIHYDROPYRIMIDINASE-RELATED PROTEIN 2
Gene (Uniprot):DPYSL2
Chain IDs:A, B, C, D
Chain Length:501
Number of Molecules:4
Biological Source:HOMO SAPIENS
Ligand Molecules
Primary Citation
Crystal and Solution Structure, Stability and Post- Translational Modifications of Collapsin Response Mediator Protein 2.
FEBS J. 275 4583 ? (2008)
PMID: 18699782 DOI: 10.1111/J.1742-4658.2008.06601.X

Abstact

The collapsin response mediator protein 2 (CRMP-2) is a central molecule regulating axonal growth cone guidance. It interacts with the cytoskeleton and mediates signals related to myelin-induced axonal growth inhibition. CRMP-2 has also been characterized as a constituent of neurofibrillary tangles in Alzheimer's disease. CD spectroscopy and thermal stability assays using the Thermofluor method indicated that Ca2+ and Mg2+ affect the stability of CRMP-2 and prevent the formation of beta-aggregates upon heating. Gel filtration showed that the presence of Ca2+ or Mg2+ promoted the formation of CRMP-2 homotetramers, and this was further proven by small-angle X-ray scattering experiments, where a 3D solution structure for CRMP-2 was obtained. Previously, we described a crystal structure of human CRMP-2 complexed with calcium. In the present study, we determined the structure of CRMP-2 in the absence of calcium at 1.9 A resolution. When Ca2+ was omitted, crystals could only be grown in the presence of Mg2+ ions. By a proteomic approach, we further identified a number of post-translational modifications in CRMP-2 from rat brain hippocampus and mapped them onto the crystal structure.

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Primary Citation of related structures