2VL8 image
Entry Detail
PDB ID:
2VL8
Keywords:
Title:
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF LETHAL TOXIN FROM CLOSTRIDIUM SORDELLII IN COMPLEX WITH UDP, CASTANOSPERMINE AND CALCIUM ION
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2008-01-09
Release Date:
2008-06-17
Method Details:
Experimental Method:
Resolution:
2.31 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:CYTOTOXIN L
Mutations:YES
Chain IDs:A, B, C
Chain Length:546
Number of Molecules:3
Biological Source:CLOSTRIDIUM SORDELLII
Primary Citation
Inhibition of the Glucosyltransferase Activity of Clostridial Rho/Ras-Glucosylating Toxins by Castanospermine.
FEBS Lett. 582 2277 ? (2008)
PMID: 18505687 DOI: 10.1016/J.FEBSLET.2008.05.025

Abstact

Castanospermine was identified as an inhibitor of the Rho/Ras-glucosylating Clostridium sordellii lethal toxin and Clostridium difficile toxin B. Microinjection of castanospermine into embryonic bovine lung cells prevented the cytotoxic effects of toxins. The crystal structure of the glucosyltransferase domain of C. sordellii lethal toxin in complex with castanospermine, UDP and a calcium ion was solved at a resolution of 2.3A. The inhibitor binds in a conformation that brings its four hydroxyl groups and its N-atom almost exactly in the positions of the four hydroxyls and of the ring oxygen of the glucosyl moiety of UDP-glucose, respectively.

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Primary Citation of related structures