2VKM image
Deposition Date 2007-12-04
Release Date 2008-12-16
Last Version Date 2024-10-09
Entry Detail
PDB ID:
2VKM
Keywords:
Title:
Crystal structure of GRL-8234 bound to BACE (Beta-secretase)
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BETA-SECRETASE 1
Gene (Uniprot):BACE1
Chain IDs:A, B, C, D
Chain Length:389
Number of Molecules:4
Biological Source:HOMO SAPIENS
Ligand Molecules
Primary Citation
Potent Memapsin 2 (Beta-Secretase) Inhibitors: Design, Synthesis, Protein-Ligand X-Ray Structure, and in Vivo Evaluation.
Bioorg.Med.Chem.Lett. 18 1031 ? (2008)
PMID: 18180160 DOI: 10.1016/J.BMCL.2007.12.028

Abstact

Structure-based design, synthesis, and biological evaluation of a series of peptidomimetic beta-secretase inhibitors incorporating hydroxyethylamine isosteres are described. We have identified inhibitor 24 which has shown exceedingly potent activity in memapsin 2 enzyme inhibitory (K(i) 1.8 nM) and cellular (IC(50)=1 nM in Chinese hamster ovary cells) assays. Inhibitor 24 has also shown very impressive in vivo properties (up to 65% reduction of plasma A beta) in transgenic mice. The X-ray structure of protein-ligand complex of memapsin 2 revealed critical interactions in the memapsin 2 active site.

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