2VKJ image
Deposition Date 2007-12-19
Release Date 2008-04-08
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2VKJ
Title:
Structure of the soluble domain of the membrane protein TM1634 from Thermotoga maritima
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TM1634
Gene (Uniprot):TM_1634
Chain IDs:A, B
Chain Length:106
Number of Molecules:2
Biological Source:THERMOTOGA MARITIMA
Ligand Molecules
Primary Citation
Structure and Ligand Binding of the Soluble Domain of a Thermotoga Maritima Membrane Protein of Unknown Function Tm1634.
Protein Sci. 17 869 ? (2008)
PMID: 18369189 DOI: 10.1110/PS.083432208

Abstact

As a part of the Joint Center for Structural Genomics (JCSG) biological targets, the structures of soluble domains of membrane proteins from Thermotoga maritima were pursued. Here, we report the crystal structure of the soluble domain of TM1634, a putative membrane protein of 128 residues (15.1 kDa) and unknown function. The soluble domain of TM1634 is an alpha-helical dimer that contains a single tetratrico peptide repeat (TPR) motif in each monomer where each motif is similar to that found in Tom20. The overall fold, however, is unique and a DALI search does not identify similar folds beyond the 38-residue TPR motif. Two different putative ligand binding sites, in which PEG200 and Co(2+) were located, were identified using crystallography and NMR, respectively.

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