2VKE image
Entry Detail
PDB ID:
2VKE
Keywords:
Title:
Tet repressor class D complexed with cobalt and tetracycline
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2007-12-18
Release Date:
2008-07-01
Method Details:
Experimental Method:
Resolution:
1.62 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:TETRACYCLINE REPRESSOR PROTEIN CLASS D
Chain IDs:A
Chain Length:207
Number of Molecules:1
Biological Source:ESCHERICHIA COLI
Primary Citation
Specific Binding of Divalent Metal Ions to Tetracycline and to the Tet Repressor/Tetracycline Complex.
J.Biol.Inorg.Chem. 13 1097 ? (2008)
PMID: 18548290 DOI: 10.1007/S00775-008-0395-2

Abstact

Tetracyclines coordinate metal(II) ions under physiological conditions forming chelate complexes with their ketoenolate moiety at rings B and C. These metal(II) complexes are the biologically relevant molecules conferring the antibiotic character of the drug by inhibiting ribosomal protein biosynthesis in prokaryotes. The Tet repressor, TetR, is the molecular switch for tetracycline resistance determinants in gram-negative bacteria. TetR controls transcription of a gene encoding the integral membrane protein TetA, which mediates active efflux of a tetracycline-metal(II) cation, [MeTc](+), by equimolar antiport with a proton. We evaluated distinct characteristics of the metal binding by crystal structure determination of TetR/[MeTc](+) complexes and of association equilibrium constants of [MeTc](+) and TetR/[MeTc](+) complexes. Various divalent metal ions bind to the same octahedral coordination site, defined by a histidine side chain of TetR, the tetracycline, and three water molecules. Whereas association constants for [MeTc](+) vary within 3 orders of magnitude, association of the [MeTc](+) cation to TetR is very similar for all measured divalent metals. Taking intracellular cation concentrations into account, it is evident that no other metal ion can compete with Mg(2+) for TetR/[MeTc](+) complex formation.

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