2VIV image
Deposition Date 2007-12-05
Release Date 2008-01-22
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2VIV
Keywords:
Title:
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.72 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B
Gene (Uniprot):PLAU
Mutations:YES
Chain IDs:A
Chain Length:253
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator.
J.Med.Chem. 51 183 ? (2008)
PMID: 18163548 DOI: 10.1021/JM701359Z

Abstact

Fragment-based lead discovery has been applied to urokinase-type plasminogen activator (uPA). The (R)-enantiomer of the orally active drug mexiletine 5 (a fragment hit from X-ray crystallographic screening) was the chemical starting point. Structure-aided design led to elaborated inhibitors that retained the key interactions of (R)-5 while gaining extra potency by simultaneously occupying neighboring regions of the active site. Subsequent optimization led to 15, a potent, selective, and orally bioavailable inhibitor of uPA.

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