2VG6 image
Entry Detail
PDB ID:
2VG6
Keywords:
Title:
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2007-11-08
Release Date:
2007-12-11
Method Details:
Experimental Method:
Resolution:
3.01 Å
R-Value Free:
0.33
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Chain IDs:A
Chain Length:557
Number of Molecules:1
Biological Source:HUMAN IMMUNODEFICIENCY VIRUS 1
Polymer Type:polypeptide(L)
Description:P51 RT
Chain IDs:B
Chain Length:428
Number of Molecules:1
Biological Source:HUMAN IMMUNODEFICIENCY VIRUS 1
Ligand Molecules
Primary Citation
Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun. 365 764 ? (2008)
PMID: 18035053 DOI: 10.1016/J.BBRC.2007.11.036

Abstact

O-Phthalimidoethyl-N-arylthiocarbamates (TCs) have been recently identified as a new class of potent HIV-1 reverse transcriptase (RT) non-nucleoside inhibitors (NNRTIs), by means of computer-aided drug design techniques [Ranise A. Spallarossa, S. Cesarini, F. Bondavalli, S. Schenone, O. Bruno, G. Menozzi, P. Fossa, L. Mosti, M. La Colla, et al., Structure-based design, parallel synthesis, structure-activity relationship, and molecular modeling studies of thiocarbamates, new potent non-nucleoside HIV-1 reverse transcriptase inhibitor isosteres of phenethylthiazolylthiourea derivatives, J. Med. Chem. 48 (2005) 3858-3873]. To elucidate the atomic details of RT/TC interaction and validate an earlier TC docking model, the structures of three RT/TC complexes were determined at 2.8-3.0A resolution by X-ray crystallography. The conformations adopted by the enzyme-bound TCs were analyzed and compared with those of bioisosterically related NNRTIs.

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