2VDD image
Deposition Date 2007-10-04
Release Date 2008-04-22
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2VDD
Title:
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:OUTER MEMBRANE PROTEIN TOLC
Gene (Uniprot):tolC
Mutagens:YES
Chain IDs:A, B, C
Chain Length:460
Number of Molecules:3
Biological Source:ESCHERICHIA COLI
Primary Citation
Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell 30 114 ? (2008)
PMID: 18406332 DOI: 10.1016/J.MOLCEL.2008.02.015

Abstact

Drugs and certain proteins are transported across the membranes of Gram-negative bacteria by energy-activated pumps. The outer membrane component of these pumps is a channel that opens from a sealed resting state during the transport process. We describe two crystal structures of the Escherichia coli outer membrane protein TolC in its partially open state. Opening is accompanied by the exposure of three shallow intraprotomer grooves in the TolC trimer, where our mutagenesis data identify a contact point with the periplasmic component of a drug efflux pump, AcrA. We suggest that the assembly of multidrug efflux pumps is accompanied by induced fit of TolC driven mainly by accommodation of the periplasmic component.

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Primary Citation of related structures