2V4X image
Deposition Date 2008-09-30
Release Date 2008-11-25
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2V4X
Keywords:
Title:
Crystal Structure of Jaagsiekte Sheep Retrovirus Capsid N-terminal domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CAPSID PROTEIN P27
Gene (Uniprot):gag
Chain IDs:A
Chain Length:140
Number of Molecules:1
Biological Source:JAAGSIEKTE SHEEP RETROVIRUS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Structure of the Capsid Amino-Terminal Domain from the Betaretrovirus, Jaagsiekte Sheep Retrovirus.
J.Mol.Biol. 386 1179 ? (2009)
PMID: 19007792 DOI: 10.1016/J.JMB.2008.10.066

Abstact

Jaagsiekte sheep retrovirus is a betaretrovirus and the causative agent of pulmonary adenocarcinoma, a transmissible lung tumour of sheep. Here we report the crystal structure of the capsid amino-terminal domain and examine the self-association properties of Jaagsiekte sheep retrovirus capsid. We find that the structure is remarkably similar to the amino-terminal domain of the alpharetrovirus, avian leukosis virus, revealing a previously undetected evolutionary similarity. Examination of capsid self-association suggests a mode of assembly not driven by the strong capsid carboxy-terminal domain interactions that characterise capsid assembly in the lentiviruses. Based on these data, we propose this structure provides a model for the capsid of betaretroviruses including the HML-2 family of endogenous human betaretroviruses.

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Primary Citation of related structures