2V3Q image
Entry Detail
PDB ID:
2V3Q
Title:
Serendipitous discovery and X-ray structure of a human phosphate binding apolipoprotein
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2007-06-20
Release Date:
2008-07-22
Method Details:
Experimental Method:
Resolution:
1.89 Å
R-Value Free:
0.18
R-Value Work:
0.12
R-Value Observed:
0.13
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HUMAN PHOSPHATE BINDING PROTEIN
Chain IDs:A
Chain Length:376
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Tandem Use of X-Ray Crystallography and Mass Spectrometry to Obtain Ab Initio the Complete and Exact Amino Acids Sequence of Hpbp, a Human 38kDa Apolipoprotein
Proteins: Struct., Funct., Bioinf. 71 1708 ? (2008)
PMID: 18076037 DOI: 10.1002/PROT.21866

Abstact

The Human Phosphate Binding Protein (HPBP) is a serendipitously discovered apolipoprotein from human plasma that binds phosphate. Amino acid sequence relates HPBP to an intriguing protein family that seems ubiquitous in eukaryotes. These proteins, named DING according to the sequence of their four conserved N-terminal residues, are systematically absent from eukaryotic genome databases. As a consequence, HPBP amino acids sequence had to be first assigned from the electronic density map. Then, an original approach combining X-ray crystallography and mass spectrometry provides the complete and a priori exact sequence of the 38-kDa HPBP. This first complete sequence of a eukaryotic DING protein will be helpful to study HPBP and the entire DING protein family.

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