ISDA

Deposition Date 2007-03-19

Release Date 2007-05-08

Last Version Date 2024-11-06

Entry Detail

PDB ID:

2UW3

Keywords:

TRANSFERASE/INHIBITOR

Title:

Structure of PKA-PKB chimera complexed with 5-methyl-4-phenyl-1H- pyrazole

Biological Source:

Source Organism:

BOS TAURUS (Taxon ID: 9913)
HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

ESCHERICHIA COLI

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.19 Å

R-Value Free:

0.25

R-Value Work:

0.18

R-Value Observed:

0.19

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT
Gene (Uniprot):PRKACA
Mutations:YES
Chain IDs:A
Chain Length:351
Number of Molecules:1
Biological Source:BOS TAURUS

UniProt ID:P00517 Pfam ID:PF00069 EC:2.7.11.11

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA
Gene (Uniprot):PKIA
Chain IDs:B (auth: I)
Chain Length:20
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:P61925 EC:2.7.11.11

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
SEP	A	SER	PHOSPHOSERINE
TPO	A	THR	PHOSPHOTHREONINE

Ligand Molecules

GVG

Primary Citation

Identification of Inhibitors of Protein Kinase B Using Fragment-Based Lead Discovery

Saxty, G, Woodhead, S.J, Berdini, V, Davies, T.G, Verdonk, M.L, Wyatt, P.G, Boyle, R.G, Barford, D, Downham, R, Garrett, M.D, Carr, R.A.Show

J.Med.Chem. 50 2293 ? (2007)

PMID: 17451234 DOI: 10.1021/JM070091B

Abstact

Using fragment-based screening techniques, 5-methyl-4-phenyl-1H-pyrazole (IC50 80 microM) was identified as a novel, low molecular weight inhibitor of protein kinase B (PKB). Herein we describe the rapid elaboration of highly potent and ligand efficient analogues using a fragment growing approach. Iterative structure-based design was supported by protein-ligand structure determinations using a PKA-PKB "chimera" and a final protein-ligand structure of a lead compound in PKBbeta itself.

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Protein

Chemical

Disease

Primary Citation of related structures