2RRT image
Deposition Date 2011-04-27
Release Date 2011-05-25
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2RRT
Title:
Solution structure of Magnesium-bound form of calmodulin C-domain E104D/E140D mutant
Biological Source:
Source Organism:
Xenopus laevis (Taxon ID: 8355)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Calmodulin
Mutations:E28D, E64D
Chain IDs:A
Chain Length:72
Number of Molecules:1
Biological Source:Xenopus laevis
Ligand Molecules
Primary Citation
Solution structure and fluctuation of the Mg(2+)-bound form of calmodulin C-terminal domain
Protein Sci. 20 690 701 (2011)
PMID: 21312310 DOI: 10.1002/pro.598

Abstact

Calmodulin (CaM) is a Ca(2+)-binding protein that functions as a ubiquitous Ca(2+)-signaling molecule, through conformational changes from the "closed" apo conformation to the "open" Ca(2+)-bound conformation. Mg(2+) also binds to CaM and stabilizes its folded structure, but the NMR signals are broadened by slow conformational fluctuations. Using the E104D/E140D mutant, designed to decrease the signal broadening in the presence of Mg(2+) with minimal perturbations of the overall structure, the solution structure of the Mg(2+)-bound form of the CaM C-terminal domain was determined by multidimensional NMR spectroscopy. The Mg(2+)-induced conformational change mainly occurred in EF hand IV, while EF-hand III retained the apo structure. The helix G and helix H sides of the binding sequence undergo conformational changes needed for the Mg(2+) coordination, and thus the helices tilt slightly. The aromatic rings on helix H move to form a new cluster of aromatic rings in the hydrophobic core. Although helix G tilts slightly to the open orientation, the closed conformation is maintained. The fact that the Mg(2+)-induced conformational changes in EF-hand IV and the hydrophobic core are also seen upon Ca(2+) binding suggests that the Ca(2+)-induced conformational changes can be divided into two categories, those specific to Ca(2+) and those common to Ca(2+) and Mg(2+).

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Primary Citation of related structures