2RR4 image
Entry Detail
PDB ID:
2RR4
Title:
Complex structure of the zf-CW domain and the H3K4me3 peptide
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-03-24
Release Date:
2010-09-15
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Zinc finger CW-type PWWP domain protein 1
Chain IDs:A
Chain Length:69
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Histone H3
Chain IDs:B
Chain Length:10
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
M3L B LYS N-TRIMETHYLLYSINE
Ligand Molecules
Primary Citation
Structural insight into the zinc finger CW domain as a histone modification reader
Structure 18 1127 1139 (2010)
PMID: 20826339 DOI: 10.1016/j.str.2010.06.012

Abstact

The zinc finger CW (zf-CW) domain is a motif of about 60 residues that is frequently found in proteins involved in epigenetic regulation. Here, we determined the NMR solution structure of the zf-CW domain of the human zf-CW and PWWP domain containing protein 1 (ZCWPW1). The zf-CW domain adopts a new fold in which a zinc ion is coordinated tetrahedrally by four conserved Cys ligand residues. The tertiary structure of the zf-CW domain partially resembles that adopted by the plant homeo domain (PHD) finger bound to the histone tail, suggesting that the zf-CW domain and the PHD finger have similar functions. The solution structure of the complex of the zf-CW domain with the histone H3 tail peptide (1-10) with trimethylated K4 clarified its binding mode. Our structural and biochemical studies have identified the zf-CW domain as a member of the histone modification reader modules for epigenetic regulation.

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Primary Citation of related structures