2RFH image
Deposition Date 2007-09-29
Release Date 2008-04-22
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2RFH
Keywords:
Title:
Crystal Structure Analysis of CPA-2-benzyl-3-nitropropanoic acid complex
Biological Source:
Source Organism(s):
Bos taurus (Taxon ID: )
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Carboxypeptidase A1
Chain IDs:A
Chain Length:307
Number of Molecules:1
Biological Source:Bos taurus
Primary Citation
Nitro as a novel zinc-binding group in the inhibition of carboxypeptidase A
Bioorg.Med.Chem. 16 3596 3601 (2008)
PMID: 18289863 DOI: 10.1016/j.bmc.2008.02.010

Abstact

2-Substituted 3-nitropropanoic acids were designed and synthesized as inhibitors against carboxypeptidase A (CPA). (R)-2-Benzyl- 3-nitropropanoic acid showed a potent inhibition against CPA (K(i)=0.15 microM). X-ray crystallography discloses that the nitro group well mimics the transition state occurred in the hydrolysis catalyzed by CPA, that is, an O,O'-bidentate coordination to the zinc ion and the two respective hydrogen bonds with Glu-270 and Arg-127. Because the nitro group is a planar species, we proposed (R)-2-benzyl-3-nitropropanoic acid as a pseudo-transition-state analog inhibitor against CPA.

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Primary Citation of related structures
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