2R0P image
Deposition Date 2007-08-20
Release Date 2007-09-25
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2R0P
Keywords:
Title:
K252c-soaked RebC
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.25
R-Value Work:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RebC
Gene (Uniprot):rbmD
Chain IDs:A
Chain Length:549
Number of Molecules:1
Biological Source:Lechevalieria aerocolonigenes
Primary Citation
Crystallographic trapping in the rebeccamycin biosynthetic enzyme RebC
Proc.Natl.Acad.Sci.Usa 104 15311 15316 (2007)
PMID: 17873060 DOI: 10.1073/pnas.0707190104

Abstact

The biosynthesis of rebeccamycin, an antitumor compound, involves the remarkable eight-electron oxidation of chlorinated chromopyrrolic acid. Although one rebeccamycin biosynthetic enzyme is capable of generating low levels of the eight-electron oxidation product on its own, a second protein, RebC, is required to accelerate product formation and eliminate side reactions. However, the mode of action of RebC was largely unknown. Using crystallography, we have determined a likely function for RebC as a flavin hydroxylase, captured two snapshots of its dynamic catalytic cycle, and trapped a reactive molecule, a putative substrate, in its binding pocket. These studies strongly suggest that the role of RebC is to sequester a reactive intermediate produced by its partner protein and to react with it enzymatically, preventing its conversion to a suite of degradation products that includes, at low levels, the desired product.

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