2QY2 image
Deposition Date 2007-08-13
Release Date 2008-04-01
Last Version Date 2024-02-21
Entry Detail
PDB ID:
2QY2
Title:
Characterization of a trifunctional mimivirus mRNA capping enzyme and crystal structure of the RNA triphosphatase domainm.
Biological Source:
Source Organism:
Mimivirus (Taxon ID: 315393)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Probable mRNA-capping enzyme
Gene (Uniprot):MIMI_R382
Chain IDs:A, B
Chain Length:238
Number of Molecules:2
Biological Source:Mimivirus
Primary Citation
Characterization of a trifunctional mimivirus mRNA capping enzyme and crystal structure of the RNA triphosphatase domain.
Structure 16 501 512 (2008)
PMID: 18400173 DOI: 10.1016/j.str.2008.01.009

Abstact

The RNA triphosphatase (RTPase) components of the mRNA capping apparatus are a bellwether of eukaryal taxonomy. Fungal and protozoal RTPases belong to the triphosphate tunnel metalloenzyme (TTM) family, exemplified by yeast Cet1. Several large DNA viruses encode metal-dependent RTPases unrelated to the cysteinyl-phosphatase RTPases of their metazoan host organisms. The origins of DNA virus RTPases are unclear because they are structurally uncharacterized. Mimivirus, a giant virus of amoeba, resembles poxviruses in having a trifunctional capping enzyme composed of a metal-dependent RTPase module fused to guanylyltransferase (GTase) and guanine-N7 methyltransferase domains. The crystal structure of mimivirus RTPase reveals a minimized tunnel fold and an active site strikingly similar to that of Cet1. Unlike homodimeric fungal RTPases, mimivirus RTPase is a monomer. The mimivirus TTM-type RTPase-GTase fusion resembles the capping enzymes of amoebae, providing evidence that the ancestral large DNA virus acquired its capping enzyme from a unicellular host.

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