2QU5 image
Entry Detail
PDB ID:
2QU5
Keywords:
Title:
Crystal structure of the VEGFR2 kinase domain in complex with a benzimidazole inhibitor
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2007-08-03
Release Date:
2007-09-25
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.25
R-Value Work:
0.21
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Vascular endothelial growth factor receptor 2
Mutations:C817A, V916T, E990V
Chain IDs:A
Chain Length:314
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Design, Synthesis, and Evaluation of Orally Active Benzimidazoles and Benzoxazoles as Vascular Endothelial Growth Factor-2 Receptor Tyrosine Kinase Inhibitors.
J.Med.Chem. 50 4351 4373 (2007)
PMID: 17696416 DOI: 10.1021/jm070034i

Abstact

Inhibition of the VEGF signaling pathway has become a valuable approach in the treatment of cancers. Guided by X-ray crystallography and molecular modeling, a series of 2-aminobenzimidazoles and 2-aminobenzoxazoles were identified as potent inhibitors of VEGFR-2 (KDR) in both enzymatic and HUVEC cellular proliferation assays. In this report we describe the synthesis and structure-activity relationship of a series of 2-aminobenzimidazoles and benzoxazoles, culminating in the identification of benzoxazole 22 as a potent and selective VEGFR-2 inhibitor displaying a good pharmacokinetic profile. Compound 22 demonstrated efficacy in both the murine matrigel model for vascular permeability (79% inhibition observed at 100 mg/kg) and the rat corneal angiogenesis model (ED(50) = 16.3 mg/kg).

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