2QRN image
Deposition Date 2007-07-28
Release Date 2007-12-11
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2QRN
Keywords:
Title:
Human Deoxycytidine kinase dCMP, UDP, Mg ion product complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Deoxycytidine kinase
Gene (Uniprot):DCK
Chain IDs:A, B, C, D
Chain Length:280
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Structures of human deoxycytidine kinase product complexes.
Acta Crystallogr.,Sect.D 63 1201 1207 (2007)
PMID: 18084067 DOI: 10.1107/S0907444907048834

Abstact

Human deoxycytidine kinase (dCK) is involved in the nucleotide-biosynthesis salvage pathway and has also been shown to phosphorylate several antitumor and antiviral prodrugs. The structures of dCK alone and the dead-end complex of dCK with substrate nucleoside and product ADP or UDP have previously been reported; however, there is currently no structure available for a substrate or product complex. Here, the structures of dCK complexes with the products dCMP, UDP and Mg2+ ion, and with dAMP, UDP and Mg2+ ion are reported. Structural comparisons show that the product complexes with UDP and a dead-end complex with substrate and UDP have similar active-site conformations.

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Primary Citation of related structures