2QF7 image
Deposition Date 2007-06-27
Release Date 2007-09-04
Last Version Date 2025-03-26
Entry Detail
PDB ID:
2QF7
Keywords:
Title:
Crystal structure of a complete multifunctional pyruvate carboxylase from Rhizobium etli
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Pyruvate carboxylase protein
Gene (Uniprot):pyc
Chain IDs:A, B
Chain Length:1165
Number of Molecules:2
Biological Source:Rhizobium etli
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KCX A LYS LYSINE NZ-CARBOXYLIC ACID
Primary Citation
Domain architecture of pyruvate carboxylase, a biotin-dependent multifunctional enzyme
Science 317 1076 1079 (2007)
PMID: 17717183 DOI: 10.1126/science.1144504

Abstact

Biotin-dependent multifunctional enzymes carry out metabolically important carboxyl group transfer reactions and are potential targets for the treatment of obesity and type 2 diabetes. These enzymes use a tethered biotin cofactor to carry an activated carboxyl group between distantly spaced active sites. The mechanism of this transfer has remained poorly understood. Here we report the complete structure of pyruvate carboxylase at 2.0 angstroms resolution, which shows its domain arrangement. The structure, when combined with mutagenic analysis, shows that intermediate transfer occurs between active sites on separate polypeptide chains. In addition, domain rearrangements associated with activator binding decrease the distance between active-site pairs, providing a mechanism for allosteric activation. This description provides insight into the function of biotin-dependent enzymes and presents a new paradigm for multifunctional enzyme catalysis.

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