2QE3 image
Deposition Date 2007-06-22
Release Date 2007-07-17
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2QE3
Keywords:
Title:
Crystal structure of human tl1a extracellular domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TNF superfamily ligand TL1A
Chain IDs:A
Chain Length:184
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry 48 7636 7645 (2009)
PMID: 19522538 DOI: 10.1021/bi900031w

Abstact

TNF-like 1A (TL1A) is a newly described member of the TNF superfamily that is directly implicated in the pathogenesis of autoimmune diseases, including inflammatory bowel disease, atherosclerosis, and rheumatoid arthritis. We report the crystal structure of the human TL1A extracellular domain at a resolution of 2.5 A, which reveals a jelly-roll fold typical of the TNF superfamily. This structural information, in combination with complementary mutagenesis and biochemical characterization, provides insights into the binding interface and the specificity of the interactions between TL1A and the DcR3 and DR3 receptors. These studies suggest that the mode of interaction between TL1A and DcR3 differs from other characterized TNF ligand/receptor complexes. In addition, we have generated functional TL1A mutants with altered disulfide bonding capability that exhibit enhanced solution properties, which will facilitate the production of materials for future cell-based and whole animal studies. In summary, these studies provide insights into the structure and function of TL1A and provide the basis for the rational manipulation of its interactions with cognate receptors.

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Primary Citation of related structures