2Q9Z image
Deposition Date 2007-06-14
Release Date 2007-10-30
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2Q9Z
Keywords:
Title:
Trichodiene synthase: Complex with inorganic pyrophosphate resulting from the reaction with 2-fluorofarnesyl diphosphate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.25
R-Value Work:
0.21
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Trichodiene synthase
Gene (Uniprot):TRI5
Chain IDs:A, B
Chain Length:374
Number of Molecules:2
Biological Source:Fusarium sporotrichioides
Primary Citation
Exploring biosynthetic diversity with trichodiene synthase.
Arch.Biochem.Biophys. 466 260 266 (2007)
PMID: 17678871 DOI: 10.1016/j.abb.2007.06.016

Abstact

Trichodiene synthase is a terpenoid cyclase that catalyzes the cyclization of farnesyl diphosphate (FPP) to form the bicyclic sesquiterpene hydrocarbon trichodiene (89%), at least five sesquiterpene side products (11%), and inorganic pyrophosphate (PP(i)). Incubation of trichodiene synthase with 2-fluorofarnesyl diphosphate or 4-methylfarnesyl diphosphate similarly yields sesquiterpene mixtures despite the electronic effects or steric bulk introduced by substrate derivatization. The versatility of the enzyme is also demonstrated in the 2.85A resolution X-ray crystal structure of the complex with Mg(2+) (3)-PP(i) and the benzyl triethylammonium cation, which is a bulkier mimic of the bisabolyl carbocation intermediate in catalysis. Taken together, these findings show that the active site of trichodiene synthase is sufficiently flexible to accommodate bulkier and electronically-diverse substrates and intermediates, which could indicate additional potential for the biosynthetic utility of this terpenoid cyclase.

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Primary Citation of related structures