2Q7T image
Deposition Date 2007-06-07
Release Date 2008-05-20
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2Q7T
Keywords:
Title:
Crystal Structure of the F plasmid TraI Relaxase Domain with the Scissile Thymidine Base
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein traI
Gene (Uniprot):traI
Mutations:Y16F
Chain IDs:A, B
Chain Length:301
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Disrupting antibiotic resistance propagation by inhibiting the conjugative DNA relaxase.
Proc.Natl.Acad.Sci.Usa 104 12282 12287 (2007)
PMID: 17630285 DOI: 10.1073/pnas.0702760104

Abstact

Conjugative transfer of plasmid DNA via close cell-cell junctions is the main route by which antibiotic resistance genes spread between bacterial strains. Relaxases are essential for conjugative transfer and act by cleaving DNA strands and forming covalent phosphotyrosine linkages. Based on data indicating that multityrosine relaxase enzymes can accommodate two phosphotyrosine intermediates within their divalent metal-containing active sites, we hypothesized that bisphosphonates would inhibit relaxase activity and conjugative DNA transfer. We identified bisphosphonates that are nanomolar inhibitors of the F plasmid conjugative relaxase in vitro. Furthermore, we used cell-based assays to demonstrate that these compounds are highly effective at preventing DNA transfer and at selectively killing cells harboring conjugative plasmids. Two potent inhibitors, clodronate and etidronate, are already clinically approved to treat bone loss. Thus, the inhibition of conjugative relaxases is a potentially novel antimicrobial approach, one that selectively targets bacteria capable of transferring antibiotic resistance and generating multidrug resistant strains.

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