2Q1J image
Deposition Date 2007-05-24
Release Date 2007-08-14
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2Q1J
Keywords:
Title:
The discovery of glycine and related amino acid-based factor xa inhibitors
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Activated factor Xa heavy chain (EC 3.4.21.6)
Gene (Uniprot):F10
Chain IDs:A
Chain Length:234
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Factor X light chain (EC 3.4.21.6)
Gene (Uniprot):F10
Chain IDs:B
Chain Length:51
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

Herein, we report on the identification of three potent glycine and related amino acid-based series of FXa inhibitors containing a neutral P1 chlorophenyl pharmacophore. A X-ray crystal structure has shown that constrained glycine derivatives with optimized N-substitution can greatly increase hydrophobic interactions in the FXa active site. Also, the substitution of a pyridone ring for a phenylsulfone ring in the P4 sidechain resulted in an inhibitor with enhanced oral bioavailability.

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Primary Citation of related structures