ISDA

Deposition Date 2007-05-23

Release Date 2007-08-14

Last Version Date 2024-10-16

Entry Detail

PDB ID:

2Q15

Keywords:

HYDROLASE

Title:

Structure of BACE complexed to compound 3a

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.40 Å

R-Value Free:

0.34

R-Value Work:

0.25

R-Value Observed:

0.25

Space Group:

P 61 2 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-secretase 1
Gene (Uniprot):BACE1
Chain IDs:A
Chain Length:385
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P56817 Pfam ID:PF00026 EC:3.4.23.46

Ligand Molecules

3MR

Primary Citation

2-Amino-3,4-dihydroquinazolines as inhibitors of BACE-1 (beta-Site APP cleaving enzyme): Use of structure based design to convert a micromolar hit into a nanomolar lead.

Baxter, E.W, Conway, K.A, Kennis, L, Bischoff, F, Mercken, M.H, Winter, H.L, Reynolds, C.H, Tounge, B.A, Luo, C, Scott, M.K, Huang, Y, Braeken, M, Pieters, S.M, Berthelot, D.J, Masure, S, Bruinzeel, W.D, Jordan, A.D, Parker, M.H, Boyd, R.E, Qu, J, Alexander, R.S, Brenneman, D.E, Reitz, A.B.Show

J.Med.Chem. 50 4261 4264 (2007)

PMID: 17685503 DOI: 10.1021/jm0705408

Abstact

A new aspartic protease inhibitory chemotype bearing a 2-amino-3,4-dihydroquinazoline ring was identified by high-throughput screening for the inhibition of BACE-1. X-ray crystallography revealed that the exocyclic amino group participated in a hydrogen bonding array with the two catalytic aspartic acids of BACE-1 (Asp(32), Asp(228)). BACE-1 inhibitory potency was increased (0.9 microM to 11 nM K(i)) by substitution into the unoccupied S(1)' pocket.

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Protein

Chemical

Disease

Primary Citation of related structures