2PHF image
Entry Detail
PDB ID:
2PHF
Title:
Pterocarpus angolensis lectin complexed with Man-6
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2007-04-11
Release Date:
2007-07-10
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Lectin
Chain IDs:A, B
Chain Length:252
Number of Molecules:2
Biological Source:Pterocarpus angolensis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PCA A GLN PYROGLUTAMIC ACID
Peptide-like Molecules
PRD_900112
Primary Citation
How a plant lectin recognizes high mannose oligosaccharides
Plant Physiol. 144 1733 1741 (2007)
PMID: 17556509 DOI: 10.1104/pp.107.100867

Abstact

The crystal structure of Pterocarpus angolensis seed lectin is presented in complex with a series of high mannose (Man) oligosaccharides ranging from Man-5 to Man-9. Despite that several of the nine Man residues of Man-9 have the potential to bind in the monosaccharide-binding site, all oligomannoses are bound in the same unique way, employing the tetrasaccharide sequence Manalpha(1-2)Manalpha(1-6)[Manalpha(1-3)]Manalpha(1-. Isothermal titration calorimetry titration experiments using Man-5, Man-9, and the Man-9-containing glycoprotein soybean (Glycine max) agglutinin as ligands confirm the monovalence of Man-9 and show a 4-times higher affinity for Man-9 when it is presented to P. angolensis seed lectin in a glycoprotein context.

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Disease

Primary Citation of related structures