2PHB image
Deposition Date 2007-04-10
Release Date 2008-03-25
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2PHB
Keywords:
BLOOD CLOTTING
Title:
An Orally Efficacious Factor Xa Inhibitor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.30 Å
R-Value Free:
0.29
R-Value Work:
0.26
Space Group:
P 21 21 21
2PHB validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X, heavy chain
Gene (Uniprot):F10
Chain IDs:A
Chain Length:234
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00742 Pfam ID:PF00089, PF14670 EC:3.4.21.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X, light chain
Gene (Uniprot):F10
Chain IDs:B
Chain Length:51
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00742 Pfam ID:PF00089, PF14670 EC:3.4.21.6
Ligand Molecules
230
CA
Primary Citation
The discovery of (2R,4R)-N-(4-chlorophenyl)-N- (2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl)-4-methoxypyrrolidine-1,2-dicarboxamide (PD 0348292), an orally efficacious factor Xa inhibitor
Chem.Biol.Drug Des. 70 100 112 (2007)
PMID: 17683371 DOI: 10.1111/j.1747-0285.2007.00539.x

Abstact

Herein, we report the discovery of novel, proline-based factor Xa inhibitors containing a neutral P1 chlorophenyl pharmacophore. Through the additional incorporation of 1-(4-amino-3-fluoro-phenyl)-1H-pyridin-2-one 22, as a P4 pharmacophore, we discovered compound 7 (PD 0348292). This compound is a selective, orally bioavailable, efficacious FXa inhibitor that is currently in phase II clinical trials for the treatment and prevention of thrombotic disorders.

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Primary Citation of related structures
2PHB
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