2PFG image
Deposition Date 2007-04-04
Release Date 2007-09-25
Last Version Date 2023-11-15
Entry Detail
PDB ID:
2PFG
Keywords:
Title:
Crystal structure of human CBR1 in complex with BiGF2.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.54 Å
R-Value Free:
0.16
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Carbonyl reductase [NADPH] 1
Gene (Uniprot):CBR1
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
M0H A CYS S-(HYDROXYMETHYL)-L-CYSTEINE
Primary Citation
Glutathione traps formaldehyde by formation of a bicyclo[4.4.1]undecane adduct.
Org.Biomol.Chem. 5 3363 3367 (2007)
PMID: 17912391 DOI: 10.1039/b707602a

Abstact

Glutathione forms complex reaction products with formaldehyde, which can be further modified through enzymatic modification. We studied the non-enzymatic reaction between glutathione and formaldehyde and identified a bicyclic complex containing two equivalents of formaldehyde and one glutathione molecule by protein X-ray crystallography (PDB accession number 2PFG). We have also used (1)H, (13)C and 2D NMR spectroscopy to confirm the structure of this unusual adduct. The key feature of this adduct is the involvement of the gamma-glutamyl alpha-amine and the Cys thiol in the formation of the bicyclic ring structure. These findings suggest that the structure of GSH allows for bi-dentate masking of the reactivity of formaldehyde. As this species predominates at near physiological pH values, we suggest this adduct may have biological significance.

Legend

Protein

Chemical

Disease

Primary Citation of related structures