2PFB image
Deposition Date 2007-04-04
Release Date 2007-12-11
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2PFB
Title:
Structure of oxidized OhrR from Xanthamonas campestris
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.93 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transcriptional regulator OhrR
Gene (Uniprot):ohrR
Mutations:C131S
Chain IDs:A, B
Chain Length:153
Number of Molecules:2
Biological Source:Xanthomonas campestris
Primary Citation
Structural Mechanism of Organic Hydroperoxide Induction of the Transcription Regulator OhrR.
Mol.Cell 28 652 664 (2007)
PMID: 18042459 DOI: 10.1016/j.molcel.2007.09.016

Abstact

The Xanthomonas campestris transcription regulator OhrR contains a reactive cysteine residue (C22) that upon oxidation by organic hydroperoxides (OHPs) forms an intersubunit disulphide bond with residue C127'. Such modification induces the expression of a peroxidase that reduces OHPs to their less toxic alcohols. Here, we describe the structures of reduced and OHP-oxidized OhrR, visualizing the structural mechanism of OHP induction. Reduced OhrR takes a canonical MarR family fold with C22 and C127' separated by 15.5 A. OHP oxidation results in the disruption of the Y36'-C22-Y47' interaction network and dissection of helix alpha5, which then allows the 135 degrees rotation and 8.2 A translation of C127', formation of the C22-C127' disulphide bond, and alpha6-alpha6' helix-swapped reconfiguration of the dimer interface. These changes result in the 28 degrees rigid body rotations of each winged helix-turn-helix motif and DNA dissociation. Similar effector-induced rigid body rotations are expected for most MarR family members.

Legend

Protein

Chemical

Disease

Primary Citation of related structures