2PDZ image
Deposition Date 1997-12-10
Release Date 1998-12-30
Last Version Date 2024-05-22
Entry Detail
PDB ID:
2PDZ
Title:
SOLUTION STRUCTURE OF THE SYNTROPHIN PDZ DOMAIN IN COMPLEX WITH THE PEPTIDE GVKESLV, NMR, 15 STRUCTURES
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
15
Selection Criteria:
LOWEST ENERGIES
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SYNTROPHIN
Gene (Uniprot):Snta1
Chain IDs:A
Chain Length:86
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Specific interactions between the syntrophin PDZ domain and voltage-gated sodium channels.
Nat.Struct.Biol. 5 19 24 (1998)
PMID: 9437424 DOI: 10.1038/nsb0198-19

Abstact

Syntrophins are modular proteins belonging to the dystrophin associated glycoprotein complex and are thought to be involved in the regulation of the muscular system. Screening of peptide libraries revealed selectivity of the synotrophin PDZ domain toward the motif R/K/Q-E-S/T-X-V-COO- found to be highly conserved in the alpha-subunit C-terminus of vertebrate voltage gated sodium channels (VGSCs). The solution structure of the domain in complex with the peptide G-V-K-E-S-L-V shows specific interactions between the conserved residues in the peptide and syntrophin-characteristic residues in the domain. We propose that syntrophins localize VGSCs to the dystrophin network through its PDZ domain.

Legend

Protein

Chemical

Disease

Primary Citation of related structures