2P73 image
Deposition Date 2007-03-19
Release Date 2007-08-21
Last Version Date 2024-02-21
Entry Detail
PDB ID:
2P73
Keywords:
Title:
crystal structure of a glycosyltransferase involved in the glycosylation of the major capsid of PBCV-1
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative glycosyltransferase (Mannosyltransferase) involved in glycosylating the PBCV-1 major capsid protein
Gene (Uniprot):A064R
Chain IDs:A
Chain Length:213
Number of Molecules:1
Biological Source:Paramecium bursaria Chlorella virus 1
Primary Citation
Structure and function of a chlorella virus-encoded glycosyltransferase.
Structure 15 1031 1039 (2007)
PMID: 17850743 DOI: 10.1016/j.str.2007.07.006

Abstact

Paramecium bursaria chlorella virus-1 encodes at least five putative glycosyltransferases that are probably involved in the synthesis of the glycan components of the viral major capsid protein. The 1.6 A crystal structure of one of these glycosyltransferases (A64R) has a mixed alpha/beta fold containing a central, six-stranded beta sheet flanked by alpha helices. Crystal structures of A64R, complexed with UDP, CMP, or GDP, established that only UDP bound to A64R in the presence of Mn(2+), consistent with its high structural similarity to glycosyltransferases which utilize UDP as the sugar carrier. The structure of the complex of A64R, UDP-glucose, and Mn(2+) showed that the largest conformational change occurred when hydrogen bonds were formed with the ligands. Unlike UDP-glucose, UDP-galactose and UDP-GlcNAc did not bind to A64R, suggesting a selective binding of UDP-glucose. Thus, UDP-glucose is most likely the sugar donor for A64R, consistent with glucose occurring in the virus major capsid protein glycans.

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Primary Citation of related structures
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