2P6B image
Deposition Date 2007-03-16
Release Date 2007-06-05
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2P6B
Title:
Crystal Structure of Human Calcineurin in Complex with PVIVIT Peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Calmodulin-dependent calcineurin A subunit alpha isoform
Gene (Uniprot):PPP3CA
Chain IDs:B (auth: A), D (auth: C)
Chain Length:383
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Calcineurin subunit B isoform 1
Gene (Uniprot):PPP3R1
Chain IDs:C (auth: B), E (auth: D)
Chain Length:156
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PVIVIT 14-mer Peptide
Chain IDs:A (auth: E)
Chain Length:15
Number of Molecules:1
Biological Source:
Primary Citation

Abstact

The protein phosphatase calcineurin recognizes a wide assortment of substrates and controls diverse developmental and physiological pathways in eukaryotic cells. Dephosphorylation of the transcription factor NFAT and certain other calcineurin substrates depends on docking of calcineurin at a PxIxIT consensus site. We describe here the structural basis for recognition of the PxIxIT sequence by calcineurin. We demonstrate that the high-affinity peptide ligand PVIVIT adds as a beta-strand to the edge of a beta-sheet of calcineurin; that short peptide segments containing the PxIxIT consensus sequence suffice for calcineurin-substrate docking; and that sequence variations within the PxIxIT core modulate the K(d) of the interaction within the physiological range 1 microM to 1 mM. Calcineurin can adapt to a wide variety of substrates, because recognition requires only a PxIxIT sequence and because variation within the core PxIxIT sequence can fine-tune the affinity to match the physiological signalling requirements of individual substrates.

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