2P3T image
Deposition Date 2007-03-09
Release Date 2008-01-22
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2P3T
Keywords:
Title:
Crystal structure of human factor XA complexed with 3-Chloro-4-(2-methylamino-imidazol-1-ylmethyl)-thiophene-2-carboxylic acid [4-chloro-2-(5-chloro-pyridin-2-ylcarbamoyl)-6-methoxy-phenyl]-amide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.92 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X
Gene (Uniprot):F10
Chain IDs:A
Chain Length:52
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X
Gene (Uniprot):F10
Chain IDs:B
Chain Length:233
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Thiophene-anthranilamides as highly potent and orally available factor xa inhibitors.
Ye, B, Arnaiz, D.O, Chou, Y.L, Griedel, B.D, Karanjawala, R, Lee, W, Morrissey, M.M, Sacchi, K.L, Sakata, S.T, Shaw, K.J, Wu, S.C, Zhao, Z, Adler, M, Cheeseman, S, Dole, W.P, Ewing, J, Fitch, R, Lentz, D, Liang, A, Light, D, Morser, J, Post, J, Rumennik, G, Subramanyam, B, Sullivan, M.E, Vergona, R, Walters, J, Wang, Y.X, White, K.A, Whitlow, M, Kochanny, M.J, Adler, M, Kochanny, M.J, Bin, Y, Rumennik, G, Light, D.L, Biancalana, S, Whitlow, M, Kochanny, M.J, Adler, M, Ewing, J, Griedel, B.D, Ho, E, Karanjawala, R, Lee, W, Lentz, D, Liang, A.M, Morrissey, M.M, Phillips, G.B, Post, J, Sakata, K.L, Subramanyam, B, Vergona, R, Walters, J, White, K.A, Whitlow, M, Ye, B, Zhao, Z, Shaw, K.J, Chou, Y.L, Davey, D.D, Eagen, K.A, Griedel, B.D, Karanjawala, R, Phillips, G.B, Sacchi, K.L, Shaw, K.J, Wu, S.C, Lentz, D, Liang, A.M, Trinh, L, Morrissey, M.M, Kochanny, M.J, Adler, M, Davey, D.D, Phillips, G.B, Kim, S.H, Jancarik, J, Rumennik, G, Light, D.L, Whitlow, M, Maignan, S, Guilloteau, J.P, Pouzieux, S, Choi-Sledeski, Y.M, Becker, M.R, Klein, S.I, Ewing, W.R, Pauls, H.W, Spada, A.P, Mikol, V, Phillips, G.B, Buckman, B.O, Davey, D.D, Eagen, K.A, Guilford, W.J, Hinchman, J, Ho, E, Koovakkat, S, Liang, A.M, Light, D.R, Mohan, R, Ng, H.P, Post, J.M, Shaw, K.J, Smith, D, Subramanyam, B, Sullivan, M.E, Trinh, L, Vergona, R, Walters, J, White, K, Whitlow, M, Wu, S, Xu, W, Morrissey, M.M.Show
J.Med.Chem. 50 2967 2980 (2007)
PMID: 17536795 DOI: 10.1021/jm070125f

Abstact

There remains a high unmet medical need for a safe oral therapy for thrombotic disorders. The serine protease factor Xa (fXa), with its central role in the coagulation cascade, is among the more promising targets for anticoagulant therapy and has been the subject of intensive drug discovery efforts. Investigation of a hit from high-throughput screening identified a series of thiophene-substituted anthranilamides as potent nonamidine fXa inhibitors. Lead optimization by incorporation of hydrophilic groups led to the discovery of compounds with picomolar inhibitory potency and micromolar in vitro anticoagulant activity. Based on their high potency, selectivity, oral pharmacokinetics, and efficacy in a rat venous stasis model of thrombosis, compounds ZK 814048 (10b), ZK 810388 (13a), and ZK 813039 (17m) were advanced into development.

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