ISDA

Deposition Date 2007-02-22

Release Date 2007-03-06

Last Version Date 2024-11-20

Entry Detail

PDB ID:

2OYK

Keywords:

HYDROLASE

Title:

Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex

Biological Source:

Source Organism:

Rhodococcus sp. (Taxon ID: 1831)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.50 Å

R-Value Free:

0.19

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Endoglycoceramidase II
Chain IDs:A, B
Chain Length:481
Number of Molecules:2
Biological Source:Rhodococcus sp.

UniProt ID:O33853 Pfam ID:PF00150, PF18564 EC:3.2.1.123

Ligand Molecules

9MR

GOL

Primary Citation

The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system.

Caines, M.E, Hancock, S.M, Tarling, C.A, Wrodnigg, T.M, Stick, R.V, Stutz, A.E, Vasella, A, Withers, S.G, Strynadka, N.C.Show

Angew.Chem.Int.Ed.Engl. 46 4474 4476 (2007)

PMID: 17487923 DOI: 10.1002/anie.200700268

Primary Citation of related structures