2OQZ image
Deposition Date 2007-02-01
Release Date 2007-06-19
Last Version Date 2025-03-26
Entry Detail
PDB ID:
2OQZ
Keywords:
Title:
The crystal structure of sortase B from B.anthracis in complex with AAEK2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Sortase B
Chain IDs:A
Chain Length:223
Number of Molecules:1
Biological Source:Bacillus anthracis str.
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CS4 A CYS ?
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Activation of inhibitors by sortase triggers irreversible modification of the active site.
J.Biol.Chem. 282 23129 23139 (2007)
PMID: 17545669 DOI: 10.1074/jbc.M701857200

Abstact

Sortases anchor surface proteins to the cell wall of Gram-positive pathogens through recognition of specific motif sequences. Loss of sortase leads to large reductions in virulence, which identifies sortase as a target for the development of antibacterials. By screening 135,625 small molecules for inhibition, we report here that aryl (beta-amino)ethyl ketones inhibit sortase enzymes from staphylococci and bacilli. Inhibition of sortases occurs through an irreversible, covalent modification of their active site cysteine. Sortases specifically activate this class of molecules via beta-elimination, generating a reactive olefin intermediate that covalently modifies the cysteine thiol. Analysis of the three-dimensional structure of Bacillus anthracis sortase B with and without inhibitor provides insights into the mechanism of inhibition and reveals binding pockets that can be exploited for drug discovery.

Legend

Protein

Chemical

Disease

Primary Citation of related structures